BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012H10SP1|AL426440
(728 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1004 1404 0.0
>3x_Contig1004
Length = 3994
Score = 1404 bits (704), Expect = 0.0
Identities = 716/722 (99%), Gaps = 1/722 (0%)
Strand = Plus / Minus
Query: 2 agagttgtgttgaaatgtttggtcttgttagagtatttattgatgaggtcagataggggc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 agagttgtgttgaaatgtttggtcttgttagagtatttattgatgaggtcagataggggc 819
Query: 62 aaagagactgatcaagtgctatcctgtttacaagcacataaacatatcttaaccaaggaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 aaagagactgatcaagtgctatcctgtttacaagcacataaacatatcttaaccaaggaa 759
Query: 122 acgatgcagtatcgtgttgatttcagtagtgatgggaagatggaattacatgagcgtggt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 acgatgcagtatcgtgttgatttcagtagtgatgggaagatggaattacatgagcgtggt 699
Query: 182 atcaagaagaaatgtgaacatatcatccagttgatagaggatacttcttacttgavacgc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 698 atcaagaagaaatgtgaacatatcatccagttgatagaggatacttcttacttgaaacgc 639
Query: 242 gagcgttccaagaccgcggaaaatacacaaaaaatcgttgccggatctgccggatctcgc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gagcgttccaagaccgcggaaaatacacaaaaaatcgttgccggatctgccggatctcgc 579
Query: 302 tcagaatctctgtataacgatatttccmtcaatgcagactctttcgccggatcgtcttct 361
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 578 tcagaatctctgtataacgatatttccatcaatgcagactctttcgccggatcgtcttct 519
Query: 362 accattgatgactcggacgacttcgaatatgaacctactccaacggctcacagagatcgt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 accattgatgactcggacgacttcgaatatgaacctactccaacggctcacagagatcgt 459
Query: 422 agatcgtcctgctgtggacgaacagagaagacagagaagagagctattacgagaragart 481
||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 458 agatcgt-ctgctgtggacgaacagagaagacagagaagagagctattacgagaaagaat 400
Query: 482 ccgtaacagtgaacatcaaagaaaagtctccgcgcaggaaccagaaatcgatctattggr 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ccgtaacagtgaacatcaaagaaaagtctccgcgcaggaaccagaaatcgatctattgga 340
Query: 542 cttcgatgatgcaccagctcctgcttctccttcaatcaacaatagcaataatgctaacgt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cttcgatgatgcaccagctcctgcttctccttcaatcaacaatagcaataatgctaacgt 280
Query: 602 attcgagagcttcggtgttgatggtgaagatgatgacgatgatgaatttggtgattttca 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 attcgagagcttcggtgttgatggtgaagatgatgacgatgatgaatttggtgattttca 220
Query: 662 aagtgagaaaagtccagttccacctgcatctggtaactttaacagttttggtaacgataa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aagtgagaaaagtccagttccacctgcatctggtaactttaacagttttggtaacgataa 160
Query: 722 ta 723
||
Sbjct: 159 ta 158
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5374
Number of Sequences: 1807
Number of extensions: 5374
Number of successful extensions: 192
Number of sequences better than 1.0e-20: 1
length of query: 728
length of database: 10,358,551
effective HSP length: 16
effective length of query: 712
effective length of database: 10,329,639
effective search space: 7354702968
effective search space used: 7354702968
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)